Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012425.1 Corchorus capsularis cultivar CVL-1 contig12446, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83911

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8189--8224
3
11.7
3
94
5
63
36
0
0
63
0.94
10176--10209
10
3.4
10
87
0
50
82
0
8
8
0.85
10176--10209
15
2.3
15
94
0
59
82
0
8
8
0.85
16520--16545
2
13.0
2
100
0
52
50
0
0
50
1.00
30600--30645
12
3.8
12
100
0
92
43
17
8
30
1.79
49979--50253
138
2.0
138
95
0
498
45
14
12
27
1.81
79191--83911
642
7.3
640
79
5
4578
34
14
16
35
1.89
79190--83911
322
14.6
321
79
5
4637
34
14
16
35
1.89

Tables:   1

The End!