Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012428.1 Corchorus capsularis cultivar CVL-1 contig12449, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42576

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4024--4049
12
2.2
12
100
0
52
0
7
0
92
0.39
9254--9367
57
2.0
57
98
1
221
37
19
21
21
1.94
19971--20034
32
2.0
32
93
0
110
32
14
34
18
1.91
27402--27560
60
2.7
60
87
0
219
37
16
18
26
1.93
27401--27566
31
5.5
31
66
11
101
37
17
18
26
1.93
27598--27728
31
4.3
30
75
13
124
26
16
16
39
1.90
27628--27788
60
2.7
58
82
5
187
31
16
14
37
1.89
36307--36341
5
7.0
5
100
0
70
80
0
20
0
0.72

Tables:   1

The End!