Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012432.1 Corchorus capsularis cultivar CVL-1 contig12453, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21943

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
969--998
2
15.5
2
93
6
53
50
0
0
50
1.00
1826--1853
3
9.3
3
100
0
56
64
0
35
0
0.94
2897--3060
81
2.0
81
87
0
238
28
26
20
25
1.99
8958--9080
61
2.0
61
100
0
246
26
16
14
43
1.86
11062--11269
104
2.0
103
95
0
371
44
17
12
25
1.85
19340--19384
2
22.5
2
100
0
90
51
0
0
48
1.00

Tables:   1

The End!