Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012433.1 Corchorus capsularis cultivar CVL-1 contig12454, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52393

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
817--867
27
1.9
27
92
4
86
49
5
31
13
1.66
940--966
2
13.5
2
100
0
54
48
0
0
51
1.00
4629--4667
21
2.0
18
85
14
51
30
15
15
38
1.88
6717--6741
6
4.2
6
100
0
50
0
32
16
52
1.44
10397--10433
2
18.5
2
100
0
74
51
0
0
48
1.00
16502--16531
15
2.1
14
93
6
51
33
0
0
66
0.92
16919--16956
20
1.9
20
88
0
58
63
2
2
31
1.22
17897--17976
37
2.2
37
97
0
151
37
5
8
48
1.56
18346--18452
34
3.1
34
98
0
205
41
17
8
32
1.80
19351--19398
15
3.2
15
84
0
60
16
35
2
45
1.59
32174--32241
33
2.1
33
85
0
91
36
17
13
32
1.89
37046--37090
21
2.1
21
91
0
72
48
33
15
2
1.57
37100--37169
21
3.6
19
76
12
63
48
0
1
50
1.09
37119--37194
38
2.1
38
83
14
97
53
0
1
44
1.08
43108--43146
20
2.0
20
89
0
60
7
23
30
38
1.83

Tables:   1

The End!