Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012442.1 Corchorus capsularis cultivar CVL-1 contig12463, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5274

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1278
333
3.8
333
89
2
1951
39
14
15
30
1.87
1051--1529
251
1.9
253
94
1
854
35
16
17
31
1.92
1306--2526
333
3.7
330
89
5
1897
38
15
15
31
1.89
2375--2668
148
2.0
150
89
4
452
40
15
19
24
1.90
2522--5274
331
8.5
332
86
4
3240
39
15
14
30
1.87
2522--5148
998
2.7
992
87
4
3697
39
14
14
31
1.87
4542--5274
297
2.4
297
91
2
1146
39
17
15
28
1.90

Tables:   1

The End!