Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012443.1 Corchorus capsularis cultivar CVL-1 contig12464, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27946

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2356
335
7.1
331
84
4
2899
38
14
15
31
1.88
1--2353
668
3.5
662
84
4
3124
38
14
15
31
1.88
2980--3004
10
2.5
10
100
0
50
48
20
8
24
1.76
5083--6342
312
4.0
311
79
13
1278
37
16
15
31
1.90
6522--6597
29
2.7
28
83
6
82
39
3
19
36
1.71
6679--6707
3
9.7
3
100
0
58
68
0
0
31
0.89
12127--12158
13
2.5
13
94
0
55
81
0
18
0
0.70
13882--13966
40
2.1
40
86
4
118
43
12
16
27
1.84
21401--21487
42
2.1
42
91
0
138
36
24
19
19
1.95
23728--23761
16
2.1
16
94
0
59
29
8
11
50
1.69

Tables:   1

The End!