Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012448.1 Corchorus capsularis cultivar CVL-1 contig12469, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39972

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--171
72
2.4
72
96
0
315
28
11
15
45
1.80
627--670
10
4.2
11
86
13
58
43
0
2
54
1.12
894--938
18
2.5
18
92
0
72
55
2
0
42
1.12
1358--1424
3
22.0
3
83
3
80
65
2
1
29
1.16
14607--14632
3
8.7
3
100
0
52
30
0
0
69
0.89
15121--15156
2
18.0
2
100
0
72
50
0
0
50
1.00
17533--17570
20
1.9
20
88
0
58
31
5
7
55
1.51
23707--23731
11
2.3
11
100
0
50
28
0
40
32
1.57
39946--39972
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!