Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012451.1 Corchorus capsularis cultivar CVL-1 contig12472, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38179

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11481--11514
5
6.8
5
89
0
50
82
0
17
0
0.67
12754--13048
108
2.7
109
89
5
432
36
11
1
49
1.48
14904--14931
2
14.0
2
100
0
56
50
0
0
50
1.00
19664--19697
7
4.9
7
92
0
59
44
41
11
2
1.56
19673--19703
14
2.2
14
94
0
53
48
35
9
6
1.62
24249--24295
24
2.0
24
91
4
78
38
10
4
46
1.58
24558--24584
2
13.5
2
100
0
54
51
0
0
48
1.00
28856--28900
23
2.0
22
91
8
74
22
6
0
71
1.09
31810--31868
29
2.1
29
93
3
102
50
15
5
28
1.65
32222--32254
1
33.0
1
93
0
57
3
0
0
96
0.20

Tables:   1

The End!