Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012460.1 Corchorus capsularis cultivar CVL-1 contig12481, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64173

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--28
2
13.0
2
100
0
52
50
0
0
50
1.00
348--374
2
13.5
2
100
0
54
51
0
0
48
1.00
373--445
35
2.1
35
100
0
146
46
2
2
47
1.31
373--431
19
3.3
19
64
22
54
45
3
3
47
1.36
5649--5681
11
2.8
12
86
4
50
45
9
9
36
1.68
8258--8291
16
2.1
16
100
0
68
32
20
23
23
1.98
9328--9357
2
15.0
2
100
0
60
50
0
0
50
1.00
11569--11603
11
3.2
11
83
0
52
77
17
5
0
0.96
29597--29625
14
2.1
14
100
0
58
31
0
13
55
1.39
29695--29764
29
2.4
29
85
2
86
40
28
10
21
1.85
45351--46728
688
2.0
687
99
0
2738
36
13
15
34
1.87
53930--53956
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!