Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012462.1 Corchorus capsularis cultivar CVL-1 contig12483, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5319

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2444
322
7.5
318
79
7
2413
34
12
16
36
1.87
698--728
8
3.8
8
95
4
53
61
0
25
12
1.32
1--2435
648
3.8
642
83
5
2723
34
12
16
36
1.87
1--2432
973
2.5
959
81
6
2661
34
12
16
36
1.87
2259--2633
197
1.9
198
82
3
470
38
7
16
37
1.78
2585--3596
349
3.0
340
82
6
1172
35
12
16
35
1.86
3698--5275
321
4.9
321
92
1
2541
33
14
17
33
1.91
3698--5275
643
2.5
641
92
2
2568
33
14
17
33
1.91

Tables:   1

The End!