Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012472.1 Corchorus capsularis cultivar CVL-1 contig12493, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18612

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3384--3413
5
6.0
5
100
0
60
20
0
0
80
0.72
3492--3525
8
4.1
8
85
7
50
23
2
14
58
1.50
4499--4605
33
3.2
32
86
5
126
7
28
39
24
1.82
12309--12373
32
2.0
32
100
0
130
36
21
20
21
1.95
17582--17617
19
1.9
19
88
5
56
33
16
2
47
1.61

Tables:   1

The End!