Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012475.1 Corchorus capsularis cultivar CVL-1 contig12496, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22664

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
770--824
26
2.1
26
100
0
110
43
27
3
25
1.71
1972--2020
21
2.3
21
85
0
62
10
32
28
28
1.90
15819--15945
53
2.4
53
82
2
148
22
16
27
33
1.95
16385--16457
37
2.0
37
88
0
110
23
30
31
15
1.95
16485--16725
89
2.7
87
84
8
306
22
27
25
24
2.00
16607--16679
38
2.0
35
86
7
101
27
21
27
23
1.99
16779--17071
54
5.6
54
75
10
216
21
28
26
23
1.99
16772--16967
108
1.8
108
82
4
252
21
28
27
22
1.99
17109--17174
31
2.1
31
97
0
123
9
31
42
16
1.80
17140--17466
75
4.4
75
90
0
485
11
29
37
20
1.89
18400--18435
19
1.9
18
88
5
54
41
2
22
33
1.68
19718--19751
16
2.2
16
89
5
52
29
2
8
58
1.43
21874--21972
33
3.0
33
82
5
103
21
43
25
10
1.83
21914--21976
33
1.9
33
93
0
108
22
44
23
9
1.82

Tables:   1

The End!