Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012477.1 Corchorus capsularis cultivar CVL-1 contig12498, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19065

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3154--3216
33
1.9
33
90
0
99
11
23
41
23
1.87
3219--3331
33
3.4
33
91
2
174
8
30
38
22
1.84
3206--3331
66
1.9
66
85
3
173
9
30
38
21
1.85
5339--5372
16
2.2
16
89
5
52
29
2
8
58
1.43
10847--10911
31
2.1
31
97
0
121
30
7
27
33
1.85
12229--12298
30
2.4
28
79
11
77
25
14
30
30
1.95
12237--12300
30
2.1
30
85
5
85
29
14
31
25
1.94
16487--16534
24
2.0
24
87
0
69
18
12
35
33
1.89
16733--16799
28
2.4
27
82
7
73
19
10
23
46
1.81
16751--16804
28
1.9
29
88
7
85
18
11
27
42
1.84
18246--18300
17
2.9
19
73
15
60
30
20
32
16
1.94
18331--18415
30
2.9
29
74
8
82
27
11
32
28
1.92

Tables:   1

The End!