Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012481.1 Corchorus capsularis cultivar CVL-1 contig12502, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21146

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10495--10609
36
3.2
37
87
6
173
29
22
10
37
1.88
10643--10723
37
2.2
37
86
0
108
19
32
9
38
1.85
10656--10741
37
2.4
37
86
2
129
18
32
8
40
1.80
10825--10998
36
4.7
35
71
19
106
24
20
9
45
1.80
10842--10983
38
3.7
40
72
16
115
25
19
9
45
1.80
10860--10983
38
3.3
38
73
17
132
25
20
7
46
1.76
10825--10997
74
2.3
74
92
0
283
24
20
9
45
1.81
10973--11260
37
7.9
37
91
4
462
25
19
9
46
1.79
10978--11260
142
2.0
144
93
1
489
25
19
9
45
1.80
11262--11344
42
2.0
42
83
4
105
26
24
16
32
1.96

Tables:   1

The End!