Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012490.1 Corchorus capsularis cultivar CVL-1 contig12511, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19297

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5838--5863
2
13.0
2
100
0
52
50
0
0
50
1.00
7649--7677
2
14.5
2
100
0
58
48
0
0
51
1.00
10712--10760
6
8.2
6
95
0
89
0
30
51
18
1.47
13471--13567
35
2.8
35
91
0
158
36
17
9
37
1.82
13473--13587
35
3.3
35
81
3
133
36
17
7
38
1.79
13570--13712
17
8.1
17
66
16
76
34
18
6
39
1.77
13576--13723
35
4.1
34
72
16
120
35
18
7
38
1.79
13595--13736
35
4.0
35
77
11
146
35
18
8
37
1.81
17698--17785
44
2.0
44
100
0
176
38
15
6
38
1.75
18408--18466
25
2.4
25
91
5
95
35
23
0
40
1.55
18476--18543
26
2.6
26
88
0
100
54
8
1
35
1.41
18476--18593
52
2.4
51
79
13
122
54
9
1
34
1.43
19036--19078
3
14.3
3
100
0
86
65
0
0
34
0.93

Tables:   1

The End!