Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012492.1 Corchorus capsularis cultivar CVL-1 contig12513, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6665

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2734--2768
2
17.0
2
94
5
61
48
2
0
48
1.16
3328--3452
16
7.8
16
73
11
103
13
10
38
37
1.79
3341--3452
32
3.5
32
88
0
152
15
9
37
37
1.80
3678--3721
16
2.8
16
89
6
63
4
11
27
56
1.53
4010--4327
171
1.9
170
88
5
480
35
11
10
43
1.74
4546--5545
22
46.8
21
64
22
165
39
9
16
35
1.81
4547--5720
44
27.3
43
68
15
244
38
9
16
35
1.82
5235--5720
22
22.5
22
69
12
238
37
9
16
36
1.81
5706--5754
22
2.2
22
85
7
64
48
2
14
34
1.55
5641--5733
44
2.1
44
78
7
100
36
8
19
35
1.82
6524--6579
17
3.4
16
76
9
67
10
33
33
21
1.88
6450--6654
34
6.2
33
89
2
245
15
37
33
13
1.86
6462--6654
67
2.9
67
85
5
225
14
36
34
14
1.87

Tables:   1

The End!