Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012493.1 Corchorus capsularis cultivar CVL-1 contig12514, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16844

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--88
33
2.7
33
89
3
124
10
30
40
18
1.83
11--63
16
3.2
16
71
5
52
7
26
45
20
1.78
94--135
14
2.7
15
82
14
50
54
2
26
16
1.54
362--412
15
3.3
15
76
10
57
15
7
39
37
1.77
343--419
32
2.4
32
95
0
136
11
9
40
38
1.73
343--429
32
2.7
31
85
3
111
10
9
40
40
1.71
581--657
16
4.8
16
82
6
102
5
9
31
54
1.54
568--657
32
2.8
32
87
0
135
5
10
31
53
1.57
568--658
16
5.6
17
74
10
84
5
10
30
52
1.59
7795--7820
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!