Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012496.1 Corchorus capsularis cultivar CVL-1 contig12517, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17952

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3139--3163
11
2.3
11
100
0
50
60
16
0
24
1.36
3211--3253
19
2.3
19
87
0
59
11
46
2
39
1.53
3564--3648
32
2.7
32
78
10
102
51
28
10
9
1.67
3558--3647
16
5.6
16
73
5
65
51
30
11
7
1.65
3855--3988
32
4.2
32
79
3
119
39
36
11
12
1.79
3882--3942
15
3.9
15
79
10
68
37
40
9
11
1.75
3856--3951
16
6.1
15
75
7
75
38
36
10
14
1.81
8063--8095
2
16.5
2
100
0
66
51
0
0
48
1.00
15548--15585
7
5.6
7
93
6
69
0
0
13
86
0.56
15546--15585
13
3.0
13
88
3
62
0
0
12
87
0.54
15935--15982
2
23.0
2
91
8
78
47
0
4
47
1.21

Tables:   1

The End!