Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012498.1 Corchorus capsularis cultivar CVL-1 contig12519, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16958

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
999--1081
41
2.0
41
100
0
166
32
40
19
7
1.79
1141--1252
32
3.5
32
87
2
136
29
35
23
11
1.90
1141--1272
16
8.3
15
72
20
83
31
34
22
10
1.88
2112--2211
16
6.4
16
73
11
82
36
36
19
9
1.83
2145--2203
29
2.0
30
83
9
77
37
38
16
6
1.76
2112--2208
45
2.1
47
88
5
144
36
36
18
9
1.83
6651--6684
3
11.3
3
100
0
68
0
32
0
67
0.91
9259--9336
41
1.9
41
86
0
111
29
26
17
25
1.98
11198--11233
17
2.1
17
90
10
56
47
16
25
11
1.79
12388--12428
18
2.3
18
86
0
55
12
26
9
51
1.70

Tables:   1

The End!