Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012499.1 Corchorus capsularis cultivar CVL-1 contig12520, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11888

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7870--7907
16
2.4
16
90
0
58
84
0
15
0
0.63
7975--8016
19
2.2
19
83
8
50
45
11
16
26
1.82
7985--8137
44
3.3
44
80
13
182
37
7
20
33
1.81
8466--8509
15
2.9
16
76
10
56
68
0
20
11
1.20
8814--8865
4
12.8
4
88
11
63
78
0
21
0
0.74
8807--8866
5
13.0
5
83
13
60
80
0
20
0
0.72
10043--10146
34
3.0
35
78
4
129
14
16
25
43
1.86
10108--10235
49
2.6
49
88
0
184
19
17
23
39
1.93
10186--10664
70
6.8
70
86
0
681
21
19
21
37
1.94
10942--11019
39
2.0
40
82
7
97
25
12
16
44
1.83

Tables:   1

The End!