Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000125.1 Corchorus capsularis cultivar CVL-1 contig00125, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2570

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
671--736
31
2.1
31
86
5
89
28
18
6
46
1.72
2152--2262
22
5.0
21
76
7
78
34
9
18
36
1.85
2197--2284
22
3.9
23
79
5
81
32
7
19
39
1.81
2196--2284
46
1.9
46
81
4
108
33
7
19
39
1.80
2356--2452
22
4.4
22
72
14
83
32
8
19
39
1.82
2356--2466
22
5.1
21
72
13
73
35
7
19
37
1.80

Tables:   1

The End!