Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012501.1 Corchorus capsularis cultivar CVL-1 contig12522, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41672

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1066--1108
21
2.0
21
100
0
86
37
9
23
30
1.86
1133--1182
23
2.2
23
92
3
84
16
12
24
48
1.79
14455--14480
7
3.7
7
100
0
52
11
0
0
88
0.52
19190--19251
1
62.0
1
77
0
52
3
0
9
87
0.66
19190--19249
15
3.9
15
80
19
63
3
0
10
86
0.67
19200--19250
26
2.0
26
84
0
66
3
0
9
86
0.70
19190--19251
11
5.6
11
80
12
65
3
0
9
87
0.66
28647--28688
22
1.9
22
90
0
66
42
11
4
40
1.63
30837--30876
21
1.9
21
85
10
55
62
2
5
30
1.29
34681--34719
12
3.2
12
92
0
69
17
23
15
43
1.87
39308--39353
20
2.2
21
92
3
76
50
13
6
30
1.66

Tables:   1

The End!