Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012502.1 Corchorus capsularis cultivar CVL-1 contig12523, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10868

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1261--1305
21
2.1
21
91
0
72
17
35
11
35
1.86
1521--1690
32
5.2
32
76
5
137
14
37
34
14
1.87
1617--1702
32
2.7
32
85
3
111
10
36
41
11
1.76
1769--1886
33
3.6
31
80
14
112
11
42
33
11
1.78
5650--5682
13
2.5
13
95
0
57
63
0
3
33
1.10
7719--7767
21
2.3
20
79
6
53
67
4
6
22
1.30
8334--8422
32
2.7
33
85
3
126
12
43
34
8
1.74

Tables:   1

The End!