Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012503.1 Corchorus capsularis cultivar CVL-1 contig12524, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23727

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59--141
30
2.8
30
87
1
114
49
12
4
33
1.61
1505--1540
10
3.6
10
96
0
63
41
22
5
30
1.76
3222--3277
25
2.2
25
93
6
96
25
23
16
35
1.94
3222--3277
13
4.5
12
95
4
94
25
23
16
35
1.94
3315--3353
12
3.6
12
80
19
50
25
28
15
30
1.96
3403--3465
20
3.3
19
76
10
58
26
19
15
38
1.92
3464--3489
10
2.6
10
100
0
52
38
23
7
30
1.83
9457--9535
12
6.5
12
95
2
140
26
24
15
34
1.94
9457--9535
37
2.2
36
95
2
140
26
24
15
34
1.94
10453--10477
13
1.9
13
100
0
50
16
12
40
32
1.84
14359--14477
30
4.0
30
85
0
166
30
10
35
24
1.88
22942--22972
16
1.9
16
93
0
53
35
9
6
48
1.62

Tables:   1

The End!