Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012505.1 Corchorus capsularis cultivar CVL-1 contig12526, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47822

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8603--8935
66
5.0
66
98
0
639
19
18
31
30
1.96
10597--10627
15
2.1
15
93
0
53
22
12
38
25
1.90
19352--19398
22
2.1
22
100
0
94
27
27
12
31
1.93
26992--27021
13
2.3
13
100
0
60
26
20
0
53
1.46
43314--43399
45
1.9
45
92
0
145
29
16
23
31
1.96
43423--43510
31
2.8
31
94
1
149
18
10
32
38
1.84
43924--43956
10
3.4
10
87
4
50
36
0
0
63
0.95
44083--44203
35
3.4
36
77
11
106
21
26
25
26
1.99
44775--44870
27
3.5
28
68
20
78
14
29
30
26
1.95
44762--44877
55
2.1
55
87
4
162
14
29
32
23
1.94
44801--44896
26
3.6
26
71
19
72
16
31
28
23
1.96
44762--44886
56
2.2
56
83
7
164
14
31
31
23
1.94
46168--46238
24
3.0
23
93
6
124
18
38
26
16
1.92
46456--46552
36
2.7
36
88
0
149
24
22
32
19
1.97

Tables:   1

The End!