Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012509.1 Corchorus capsularis cultivar CVL-1 contig12530, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21946

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
673--719
22
2.1
22
88
0
67
27
25
8
38
1.85
4839--4888
2
24.5
2
87
4
73
48
0
6
46
1.27
7361--7391
13
2.4
13
94
0
53
61
0
9
29
1.28
7496--7575
39
2.1
39
85
0
106
37
13
17
31
1.89
19114--19214
51
2.0
51
86
0
139
35
19
15
28
1.93
20938--21050
58
1.9
58
85
3
156
42
17
7
31
1.78
21531--21679
75
2.0
75
97
2
282
25
13
14
46
1.81

Tables:   1

The End!