Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012513.1 Corchorus capsularis cultivar CVL-1 contig12534, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18939

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--45
2
21.5
2
100
0
86
0
51
0
48
1.00
528--576
16
3.3
15
77
16
57
77
0
22
0
0.77
521--576
29
1.9
29
89
7
87
76
0
23
0
0.78
523--568
20
2.3
20
88
0
65
78
0
21
0
0.76
2510--2540
15
2.1
15
93
0
53
58
16
9
16
1.63
3510--3538
14
2.1
14
100
0
58
48
0
13
37
1.43
16846--16881
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!