Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012517.1 Corchorus capsularis cultivar CVL-1 contig12538, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16513

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1094--1130
3
12.3
3
100
0
74
32
0
0
67
0.91
1124--1182
22
2.7
22
92
2
75
32
8
3
55
1.46
1135--1182
22
2.2
22
100
0
96
29
8
4
58
1.46
3747--3771
7
3.6
7
100
0
50
44
0
32
24
1.54
4833--4874
20
2.1
20
100
0
84
42
4
9
42
1.58
7308--7335
13
2.2
13
100
0
56
17
28
7
46
1.75
13529--13735
110
1.9
110
95
0
378
42
19
14
23
1.87
15612--15652
17
2.4
17
95
4
73
21
4
21
51
1.67
16485--16513
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!