Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012519.1 Corchorus capsularis cultivar CVL-1 contig12540, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55481

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6813--6936
29
4.3
29
81
10
130
20
17
20
41
1.91
22875--22927
27
2.0
26
96
3
97
43
18
22
15
1.87
47012--47036
13
1.9
13
100
0
50
36
0
16
48
1.46
47827--47933
30
3.6
30
93
0
178
48
14
27
10
1.75
51516--51542
6
4.5
6
100
0
54
29
0
14
55
1.40
51823--51852
6
5.0
6
100
0
60
0
0
16
83
0.65
54021--54068
15
3.3
14
85
8
69
31
52
6
10
1.60

Tables:   1

The End!