Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012534.1 Corchorus capsularis cultivar CVL-1 contig12555, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61739

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11670--11709
4
10.0
4
84
10
55
72
0
5
22
1.04
11933--11964
15
2.1
16
94
5
57
90
0
9
0
0.45
25980--26007
14
2.0
14
100
0
56
57
0
0
42
0.99
27747--27822
29
2.6
29
77
6
82
39
18
25
17
1.91
39203--39230
2
14.0
2
100
0
56
50
0
0
50
1.00
43250--43275
13
2.0
13
100
0
52
30
38
0
30
1.58
43991--44025
10
3.6
10
88
3
54
0
31
11
57
1.34
47800--47840
5
8.0
5
86
2
55
85
0
14
0
0.60

Tables:   1

The End!