Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012537.1 Corchorus capsularis cultivar CVL-1 contig12558, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39247

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9567--9601
2
17.5
2
100
0
70
48
0
0
51
1.00
11356--11423
6
11.3
6
91
0
100
0
38
0
61
0.96
11356--11423
24
2.8
24
97
0
127
0
38
0
61
0.96
11668--11776
57
1.9
57
84
3
148
13
25
27
33
1.94
15066--15097
2
16.0
2
100
0
64
50
0
0
50
1.00
28674--28723
25
2.0
25
100
0
100
16
12
36
36
1.85
28905--28940
18
2.0
18
100
0
72
44
5
22
27
1.75
28947--29010
31
2.1
31
100
0
128
21
12
32
32
1.91
29628--29662
14
2.5
14
85
0
52
42
0
57
0
0.99
31327--31363
19
2.1
18
90
10
58
40
27
16
16
1.89
36285--39247
333
8.9
332
82
4
3407
36
16
14
32
1.89

Tables:   1

The End!