Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012542.1 Corchorus capsularis cultivar CVL-1 contig12563, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10172

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--54
27
2.0
27
88
0
79
39
7
0
52
1.30
17--96
29
2.8
30
81
9
87
40
15
0
45
1.46
44--107
29
2.2
29
94
5
112
34
18
0
46
1.49
981--1274
109
2.7
110
88
5
425
38
10
2
49
1.49
2208--2262
25
2.3
23
87
6
74
32
21
0
45
1.52
2272--2339
26
2.6
26
88
0
100
54
8
1
35
1.41
2272--2315
15
3.2
15
72
24
51
54
9
0
36
1.32
2699--2732
2
17.0
2
100
0
68
50
0
0
50
1.00
5040--5066
13
2.1
13
100
0
54
37
7
7
48
1.59
6836--6862
5
5.4
5
100
0
54
40
0
0
59
0.98
9757--9790
2
17.0
2
100
0
68
50
0
0
50
1.00

Tables:   1

The End!