Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012543.1 Corchorus capsularis cultivar CVL-1 contig12564, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49282

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20695--20719
2
12.5
2
100
0
50
52
0
0
48
1.00
25276--25372
31
3.2
31
82
2
108
34
26
20
18
1.96
30522--30552
9
3.3
9
91
8
53
80
0
19
0
0.71
30515--30552
14
2.8
13
85
14
51
84
0
15
0
0.63
36024--36067
14
3.1
14
83
0
52
81
4
9
4
0.96
37468--37753
145
2.0
145
93
0
491
35
16
9
37
1.82
39705--39730
2
13.0
2
100
0
52
50
0
0
50
1.00
40424--40460
19
2.0
18
94
5
65
18
16
21
43
1.88
42648--43137
241
2.0
243
82
9
604
34
13
17
34
1.89
47086--47173
46
1.9
46
97
0
167
39
13
6
39
1.71
48185--48229
22
2.0
22
100
0
90
22
4
17
55
1.60
48729--48787
30
2.0
30
93
0
100
59
13
11
15
1.62
49253--49281
15
1.9
15
100
0
58
86
0
13
0
0.58

Tables:   1

The End!