Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012545.1 Corchorus capsularis cultivar CVL-1 contig12566, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16597

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6240--6290
26
2.0
26
92
0
84
21
29
17
31
1.96
12041--12084
13
3.5
13
76
17
56
45
9
18
27
1.79
12054--12096
12
3.5
12
76
17
52
44
9
20
25
1.81
12040--12098
25
2.4
25
100
0
118
44
8
18
28
1.79
12495--12520
12
2.2
12
100
0
52
7
23
53
15
1.67

Tables:   1

The End!