Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012552.1 Corchorus capsularis cultivar CVL-1 contig12573, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  110102

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15442--15517
40
1.9
40
97
0
143
28
23
10
36
1.88
15590--15648
28
2.1
28
96
0
109
27
18
20
33
1.96
22713--22863
74
2.1
73
91
3
241
22
31
8
37
1.84
32208--32401
98
2.0
98
88
2
291
35
15
23
25
1.94
41656--41687
1
32.0
1
93
0
55
0
3
0
96
0.20
43489--43549
22
2.6
22
82
7
68
44
9
16
29
1.80
68255--68285
2
15.5
2
100
0
62
51
0
0
48
1.00
69096--69155
29
2.1
29
93
0
102
15
8
33
43
1.76
103448--103529
40
2.0
41
92
2
139
40
9
14
35
1.79
106630--106669
5
8.0
5
94
0
71
37
20
2
40
1.66
108854--109739
332
2.7
333
83
4
1013
37
15
12
34
1.86
109745--109788
21
2.1
21
83
8
54
20
34
6
38
1.79
109986--110056
32
2.2
32
89
0
106
7
35
43
14
1.72

Tables:   1

The End!