Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012554.1 Corchorus capsularis cultivar CVL-1 contig12575, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12433

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
390--1407
333
3.1
329
85
5
1420
34
16
14
34
1.89
3630--3673
16
2.8
17
83
13
58
11
13
34
40
1.81
4544--4624
22
3.8
21
80
4
90
38
9
12
39
1.76
11035--11443
22
18.4
22
69
13
180
35
14
9
40
1.78
11054--11222
88
1.9
88
82
7
209
33
13
10
43
1.77

Tables:   1

The End!