Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012555.1 Corchorus capsularis cultivar CVL-1 contig12576, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52968

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16152--16657
35
14.7
35
81
5
512
36
8
18
35
1.81
16182--16242
19
3.4
17
73
13
52
37
6
14
40
1.72
16151--16657
206
2.5
206
89
0
764
36
8
18
35
1.82
16449--16528
31
2.8
27
73
23
74
37
8
18
35
1.82
20472--20549
40
2.0
40
84
5
104
34
8
5
51
1.56
31834--31901
22
3.0
23
68
20
70
35
27
13
23
1.92
33046--33075
12
2.5
12
94
0
51
50
6
20
23
1.71
37050--37094
20
2.2
20
84
4
54
66
8
8
15
1.43
40070--40111
21
2.0
21
86
9
59
42
23
9
23
1.83
42148--42197
25
2.0
25
92
4
82
46
10
6
38
1.62
43840--43897
30
1.9
30
82
6
73
34
20
3
41
1.69
50039--50091
21
2.6
21
87
3
72
28
32
32
7
1.85

Tables:   1

The End!