Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012559.1 Corchorus capsularis cultivar CVL-1 contig12580, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19978

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89--230
47
3.2
44
90
4
205
38
21
6
33
1.79
88--231
44
3.2
44
91
3
209
38
22
6
32
1.81
236--288
16
3.2
17
71
26
51
3
20
0
75
0.96
958--996
9
4.3
9
81
12
53
2
17
0
79
0.84
958--999
12
3.2
12
87
12
57
2
16
0
80
0.81
958--1002
14
3.3
14
84
6
56
2
17
0
80
0.82
6129--6162
12
2.7
13
86
4
52
64
8
5
20
1.43
6107--6150
23
1.9
23
81
9
54
59
13
4
22
1.53
7080--7114
10
3.5
10
96
0
61
25
8
20
45
1.79
10216--10266
24
2.0
26
92
7
88
25
13
37
23
1.92
10039--10427
198
2.0
199
99
0
771
31
11
35
21
1.89
18001--18028
14
2.0
14
100
0
56
28
42
7
21
1.79
19170--19280
51
2.2
52
86
4
163
42
4
13
39
1.65

Tables:   1

The End!