Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012560.1 Corchorus capsularis cultivar CVL-1 contig12581, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20849

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
490--557
28
2.4
28
97
0
127
42
10
13
33
1.78
8395--8439
22
2.0
22
83
12
56
26
4
22
46
1.70
9371--9548
81
2.2
81
87
5
252
25
6
37
30
1.81
13504--13547
17
2.6
17
85
3
63
9
15
4
70
1.30
13504--13543
16
2.5
16
88
8
55
7
17
5
70
1.30
17378--17496
58
2.0
60
91
6
199
24
5
21
48
1.70
17480--17520
2
20.5
2
100
0
82
0
0
48
51
1.00
17416--17588
84
2.1
84
100
0
346
17
3
30
49
1.63
17564--17588
2
12.5
2
100
0
50
0
0
48
52
1.00
17657--17690
12
2.7
13
86
4
52
32
17
11
38
1.86

Tables:   1

The End!