Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012563.1 Corchorus capsularis cultivar CVL-1 contig12584, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20862

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2090--2459
86
4.2
89
91
6
594
38
12
4
44
1.62
2590--2626
2
18.0
2
88
5
56
45
2
2
48
1.30
2786--2839
25
2.1
26
82
6
65
29
3
16
50
1.63
3648--3803
84
1.9
83
89
5
244
37
29
12
20
1.89
3648--3824
82
2.2
80
85
8
232
37
29
11
20
1.88
6782--6820
19
2.1
19
95
0
69
15
35
0
48
1.45
7000--7207
103
2.0
103
92
0
344
27
27
13
30
1.95
14522--14547
9
2.9
9
100
0
52
57
0
11
30
1.34
16544--16570
2
13.5
2
100
0
54
51
0
0
48
1.00
16598--16628
15
2.1
15
93
0
53
54
3
6
35
1.42
17325--17383
16
3.7
16
86
8
93
40
40
13
5
1.67
19301--19340
17
2.4
17
82
0
53
17
15
15
52
1.75
19906--19965
31
1.9
31
93
0
102
30
16
15
38
1.89

Tables:   1

The End!