Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012565.1 Corchorus capsularis cultivar CVL-1 contig12586, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17794

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5757--5796
15
3.0
13
83
16
55
47
0
0
52
1.00
5704--6021
165
1.9
164
89
5
489
35
11
9
43
1.73
6238--7252
22
47.8
21
65
20
150
38
9
16
36
1.80
6235--6364
63
2.0
65
82
7
158
35
10
16
38
1.82
6633--6709
25
3.5
22
78
19
56
41
7
15
35
1.76
6667--6731
21
2.8
23
84
11
80
43
7
13
35
1.73
7052--7211
40
4.0
38
73
16
110
43
8
14
34
1.75
7156--7189
17
2.0
17
100
0
68
41
5
11
41
1.66
7005--7389
22
17.9
22
67
14
133
37
9
15
37
1.81
7423--7471
22
2.2
22
85
7
64
51
4
14
30
1.61
11453--11494
19
2.2
20
95
4
77
16
26
4
52
1.63
14111--14151
17
2.3
18
87
4
57
78
9
2
9
1.06

Tables:   1

The End!