Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012566.1 Corchorus capsularis cultivar CVL-1 contig12587, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19776

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
419--501
33
2.5
34
74
7
89
28
3
31
36
1.75
4083--4115
11
2.8
12
90
9
50
30
0
0
69
0.88
6379--6819
150
3.0
149
92
2
717
38
9
2
49
1.49
10164--10204
12
3.8
12
75
24
54
26
26
14
31
1.95
10652--10703
3
17.7
3
96
4
97
32
0
34
32
1.58
11625--11749
64
2.0
64
96
0
232
44
7
11
37
1.68
11837--11867
12
2.6
12
100
0
62
29
22
12
35
1.91
14882--14982
27
3.7
27
90
0
157
19
13
26
39
1.90
16681--16710
8
3.8
8
95
0
51
86
10
0
3
0.67

Tables:   1

The End!