Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012573.1 Corchorus capsularis cultivar CVL-1 contig12594, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8949

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1877--1927
20
2.4
22
83
9
61
41
11
5
41
1.66
2067--2095
13
2.1
14
93
6
51
48
6
20
24
1.74
5272--5329
27
2.2
27
90
3
91
39
22
15
22
1.91
5544--5644
23
4.4
23
84
2
132
7
8
21
61
1.51
5516--5644
11
11.3
11
75
10
98
6
9
23
60
1.51
5516--5641
12
10.9
12
76
10
61
7
9
23
59
1.53
5548--5709
23
7.0
23
72
10
116
10
7
19
62
1.51

Tables:   1

The End!