Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012574.1 Corchorus capsularis cultivar CVL-1 contig12595, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28578

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16722--16789
25
2.6
27
86
11
90
44
13
16
26
1.84
24717--24862
77
1.9
77
94
2
258
21
30
14
33
1.93
28209--28233
12
2.1
12
100
0
50
32
8
16
44
1.76
28451--28510
8
7.5
8
100
0
120
0
38
50
11
1.39
28505--28554
23
2.2
23
85
0
64
10
24
42
24
1.85

Tables:   1

The End!