Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012575.1 Corchorus capsularis cultivar CVL-1 contig12596, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9695

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2210--2279
27
2.6
27
86
0
86
34
41
8
15
1.78
2478--2554
16
5.3
14
70
25
61
54
3
2
38
1.33
2602--2655
13
4.2
12
77
11
54
66
3
1
27
1.19
2610--2668
27
2.3
24
86
13
75
72
5
1
20
1.12
2685--2811
32
4.0
32
74
9
89
13
38
36
11
1.81
2987--3026
20
2.0
20
95
0
71
27
20
5
47
1.70
4431--4463
17
1.9
17
93
0
57
12
18
21
48
1.80
5504--5559
27
2.1
27
86
0
76
17
32
23
26
1.97

Tables:   1

The End!