Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012577.1 Corchorus capsularis cultivar CVL-1 contig12598, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28117

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
781--814
9
3.8
9
96
0
59
23
2
20
52
1.60
1225--1255
5
6.2
5
100
0
62
38
41
19
0
1.51
9565--9622
2
31.0
2
79
19
63
51
1
0
46
1.11
9565--9620
7
7.9
7
84
4
67
51
1
0
46
1.11
10151--10211
24
2.3
26
81
16
81
31
0
32
36
1.58
13834--13884
21
2.4
22
80
9
70
17
31
29
21
1.96
17357--17390
16
2.2
16
89
5
52
29
2
8
58
1.43
25726--25774
21
2.3
21
85
0
62
10
32
28
28
1.90
26723--26768
20
2.3
20
88
3
76
41
4
15
39
1.67
27173--27332
45
3.5
45
87
3
214
45
18
10
26
1.81

Tables:   1

The End!