Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012579.1 Corchorus capsularis cultivar CVL-1 contig12600, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18960

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3437--3476
21
2.0
20
85
14
55
72
0
0
27
0.85
4807--4836
15
2.0
15
93
0
51
43
6
3
46
1.46
5057--5090
10
3.3
10
91
4
50
23
20
35
20
1.96
5607--5635
13
2.3
13
94
5
51
75
17
6
0
1.01
7067--7232
52
3.0
53
80
7
190
21
13
26
39
1.90
8575--8631
29
1.9
30
89
3
89
42
12
21
24
1.87
9479--10254
398
1.9
401
86
4
1106
25
19
30
25
1.98
10427--10680
122
2.1
122
98
0
490
33
7
16
41
1.78
12171--12221
25
2.0
27
84
7
70
66
5
13
13
1.42
14619--14644
12
2.2
12
100
0
52
26
15
7
50
1.71

Tables:   1

The End!