Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012583.1 Corchorus capsularis cultivar CVL-1 contig12604, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18184

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7007--7949
470
2.0
473
97
0
1793
35
23
13
27
1.92
14022--14239
40
5.8
38
77
11
148
46
8
20
24
1.78
14035--14168
34
3.7
35
79
13
137
48
8
20
23
1.76
14035--14276
74
3.2
73
72
14
188
46
9
20
23
1.80
14076--14226
34
4.1
35
76
12
135
45
8
22
23
1.80
14014--14261
41
6.4
42
76
8
117
44
10
20
23
1.83
14290--14363
21
3.8
21
68
23
63
48
10
10
29
1.72
14250--14465
36
6.0
36
91
4
341
47
11
12
28
1.77
14528--14774
11
22.0
11
83
4
305
56
8
25
9
1.59
14768--14836
36
1.9
36
93
0
120
43
8
20
27
1.81
14821--14909
37
2.4
37
83
14
103
50
6
19
23
1.71
16991--17057
29
2.3
29
77
10
73
41
10
20
26
1.85
17321--17354
15
2.1
16
89
10
52
0
11
5
82
0.83

Tables:   1

The End!