Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012585.1 Corchorus capsularis cultivar CVL-1 contig12606, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44598

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16217--16249
6
5.5
6
92
0
57
27
0
18
54
1.44
16564--16620
27
2.1
27
93
0
96
35
7
14
43
1.72
19660--19692
6
5.5
6
92
0
57
27
0
18
54
1.44
29714--29928
68
3.2
68
91
1
324
34
13
20
31
1.91
37293--37334
2
20.5
2
81
13
50
50
2
2
45
1.27
44279--44319
21
2.0
21
100
0
82
51
9
19
19
1.74
44309--44550
92
2.6
92
95
2
421
38
16
19
26
1.92

Tables:   1

The End!