Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012586.1 Corchorus capsularis cultivar CVL-1 contig12607, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14292

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72--510
166
2.6
165
85
3
576
29
15
15
38
1.89
868--921
27
2.0
27
96
0
99
29
9
24
37
1.86
3176--3234
18
3.4
17
73
17
59
57
0
10
32
1.32
3163--3234
34
2.1
34
97
0
135
56
0
9
33
1.32
3943--3993
25
2.0
25
85
11
68
52
1
7
37
1.42
7813--7974
67
2.4
66
82
6
184
38
15
9
36
1.81
7814--8057
22
11.1
22
68
8
102
37
17
9
34
1.83
8060--8295
22
10.5
22
69
13
131
31
17
10
40
1.83

Tables:   1

The End!